Model Reconstruction

The first step in constructing a metabolic model using ModelSEED is to load and annotate your genome sequence. The following examples demonstrate this process using ModelSEEDpy from a variety of input file types or data sources.

Examples

• Genomes Read genome

• Build Metabolic Model Build Genome-Scale Metabolic Model

• Gapfilling Gapfill Model

• Genome Classifier Using ML Model to classify genome

• Edit Edit Model

• Biochemistry ModelSEED Biochemitry database