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   "source": [
    "# Model Reconstruction"
   ]
  },
  {
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   "metadata": {},
   "source": [
    "The first step in constructing a metabolic model using ModelSEED is to load and annotate your genome sequence. The following examples demonstrate this process using ModelSEEDpy from a variety of input file types or data sources."
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "## Examples"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "* [Genomes](Genomes.ipynb) Read genome\n",
    "* [Build Metabolic Model](build_metabolic_model.ipynb) Build Genome-Scale Metabolic Model\n",
    "* [Gapfilling](Gapfilling.ipynb) Gapfill Model\n",
    "* [Genome Classifier](Classifier.ipynb) Using ML Model to classify genome\n",
    "* [Edit](add_ms_reaction.ipynb) Edit Model\n",
    "* [Biochemistry](Biochem.ipynb) ModelSEED Biochemitry database"
   ]
  }
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